Antibiotics

  • Bacitracin
  • Chloramphenicol
  • Erythromycin
  • Kanamycin
  • Nalidixic Acid
  • Nitrofurantoin
  • Novobiocin
  • Optochin
  • Penicillin
  • Streptomycin
  • Sulfamethoxazole
  • Tetracycline

Biochemical tests

  • Acid from glucose
  • Adonitol fermentation test
  • Antibiotic susceptibility tests
  • Arabinose fermentation test
  • Arabitol fermentation test
  • Arginine dihydrolase test
  • Bacitracin susceptibility test
  • Catalase test
  • Cellobiose fermentation test
  • Citrate utilization test
  • Coagulase test
  • Deoxyribonuclease (DNase) test
  • Dulcitol fermentation test
  • Esculin hydrolysis test
  • Fructose fermentation test
  • Galactose fermentation test
  • Gas from glucose
  • Gelatin hydrolysis test
  • Glucose fermentation
  • Glycerol fermentation test
  • Growth in KCN (potassium cyanide)
  • Growth on 6.5% NaCl
  • Growth on 7.5% NaCl
  • Growth on bile salts test
  • Hand Hygiene and Infection Control
  • Hemolysis on blood agar
  • Hydrogen sulfide (H2S) production test
  • Indole production test
  • Inositol fermentation
  • Kirby-Bauer Antibiotic Susceptibility Test
  • Lactose fermentation test
  • Lipase test (using corn oil)
  • Lysine decarboxylase test
  • Malonate utilization test
  • Maltose fermentation test
  • Mannitol fermentation test
  • Mannose fermentation test
  • Melezitose fermentation test
  • Melibiose fermentation test
  • Methyl red test
  • Motility test
  • myo-Inositol fermentation test
  • Nitrate reductase test
  • Novobiocin susceptibility test
  • OF glucose test
  • Optochin susceptibility test
  • Ornithine decarboxylase test
  • Oxidase test
  • Phenylalanine deaminase test
  • Raffinose fermentation test
  • Rhamnose fermentation test
  • Ribose fermentation test
  • Salicin fermentation test
  • Sorbitol fermentation test
  • Starch hydrolysis test
  • Sucrose fermentation test
  • Trehalose fermentation test
  • Urea hydrolysis test (Christiansen’s)
  • Voges-Proskauer test
  • Xylitol fermentation test
  • Xylose fermentation test

Gram negative bacilli

  • Buttiauxella agrestis
  • Cedecea davisae
  • Cedecea lapagei
  • Cedecea neteri
  • Citrobacter amalonaticus
  • Citrobacter amalonaticus biogroup 1
  • Citrobacter freundii
  • Citrobacter koseri
  • Cronobacter sakazakii
  • Edwardsiella hoshinae
  • Edwardsiella ictaluri
  • Edwardsiella tarda (wild type)
  • Edwardsiella tarda biogroup 1
  • Enterobacter aerogenes
  • Enterobacter amnigenus biogroup 1
  • Enterobacter amnigenus biogroup 2
  • Enterobacter cancerogenus
  • Enterobacter cloacae
  • Enterobacter gergoviae
  • Escherichia coli
  • Escherichia fergusonii
  • Escherichia hermannii
  • Escherichia vulneris
  • Ewingella americana
  • Hafnia alvei
  • Klebsiella oxytoca
  • Klebsiella pneumoniae subspecies ozaenae
  • Klebsiella pneumoniae subspecies pneumoniae
  • Klebsiella pneumoniae subspecies rhinoscleromatis
  • Kluyvera ascorbata
  • Kluyvera intermedia
  • Leclercia adecarboxylata
  • Mollerella wisconsinsis
  • Morganella morganii subspecies morganii
  • Morganella morganii subspecies sibonii
  • Proteus mirabilis
  • Proteus myxofaciens
  • Proteus penneri
  • Proteus vulgaris
  • Providencia alcalifaciens
  • Providencia rettgeri
  • Providencia rustigianii
  • Providencia stuartii
  • Rahnella aquatilis
  • Raoultella ornithinolytica
  • Raoultella terrigena
  • Salmonella bongori
  • Salmonella enterica
  • Salmonella enterica subspecies arizonae
  • Salmonella enterica subspecies enterica
  • Salmonella enterica subspecies houtenae
  • Salmonella enterica subspecies paratyphi
  • Salmonella enterica subspecies salamae
  • Salmonella typhi
  • Serratia ficaria
  • Serratia fonticola
  • Serratia marcescens
  • Serratia odorifera biogroup 1
  • Serratia plymuthica
  • Serratia proteamaculans subspecies proteamaculans
  • Serratia rubidaea
  • Shigella dysenteriae
  • Shigella flexneri
  • Shigella sonnei
  • Shimwellia blattae
  • Tatumella ptyseos
  • Yersinia enterocolitica
  • Yersinia frederiksenii
  • Yersinia kristensenii
  • Yersinia pestis
  • Yersinia pseudotuberculosis

Gram positive cocci

  • Dermacoccus nishinomiyaensis
  • Enterococcus avium
  • Enterococcus faecalis
  • Enterococcus faecium
  • Enterococcus gallinarum
  • Kocuria kristinae
  • Kocuria rosea
  • Kocuria varians
  • Kytococcus sedentarius
  • Lactococcus lactis
  • Lactococcus raffinolactis
  • Macrococcus caseolyticus
  • Micrococcus luteus
  • Micrococcus lylae
  • Nesterenkonia halobia
  • Rothia mucilaginosa
  • Staphylococcus aureus
  • Staphylococcus auricularis
  • Staphylococcus capitis
  • Staphylococcus caprae
  • Staphylococcus carnosus
  • Staphylococcus chromogenes
  • Staphylococcus cohnii ssp. cohnii
  • Staphylococcus cohnii ssp. urealyticum
  • Staphylococcus epidermidis
  • Staphylococcus gallinarum
  • Staphylococcus haemolyticus
  • Staphylococcus hominis
  • Staphylococcus hyicus
  • Staphylococcus intermedius
  • Staphylococcus lentus
  • Staphylococcus saccharolyticus
  • Staphylococcus saprophyticus
  • Staphylococcus sciuri
  • Staphylococcus simulans
  • Staphylococcus warneri
  • Staphylococcus xylosus
  • Streptococcus acidominimus
  • Streptococcus agalactiae
  • Streptococcus bovis
  • Streptococcus criceti
  • Streptococcus equi
  • Streptococcus equinus
  • Streptococcus ferus
  • Streptococcus iniae
  • Streptococcus mutans
  • Streptococcus pneumoniae
  • Streptococcus pyogenes
  • Streptococcus ratti
  • Streptococcus salivarius
  • Streptococcus sanguinis
  • Streptococcus sobrinus
  • Streptococcus uberis

Media

  • 6.5% NaCl broth
  • Arginine dihydrolase broth
  • Bile esculin agar slant
  • Blood agar
  • Christiansen’s urea broth
  • DNase agar with methyl green plate
  • Lysine decarboxylase broth
  • Malonate broth
  • Mannitol salt agar
  • MRVP broth
  • Mueller Hinton Agar
  • Nitrate broth with Durham tube
  • Nutrient agar plate
  • Nutrient broth
  • Nutrient gelatin
  • OF glucose broth
  • Ornithine decarboxylase broth
  • Phenol red adonitol broth
  • Phenol red arabinose broth
  • Phenol red arabitol broth
  • Phenol red cellobiose broth
  • Phenol red dulcitol broth
  • Phenol red fructose (levulose) broth
  • Phenol red galactose broth
  • Phenol red glucose (dextrose) broth with Durham tube
  • Phenol red glycerol broth
  • Phenol red inositol broth
  • Phenol red lactose broth
  • Phenol red maltose broth
  • Phenol red mannitol broth
  • Phenol red mannose broth
  • Phenol red melezitose broth
  • Phenol red melibiose broth
  • Phenol red raffinose broth
  • Phenol red rhamnose broth
  • Phenol red ribose broth
  • Phenol red salicin broth
  • Phenol red sorbitol broth
  • Phenol red sucrose (saccharose) broth
  • Phenol red trehalose broth
  • Phenol red xylitol broth
  • Phenol red xylose broth
  • Phenylalanine agar slant
  • Potassium cyanide (KCN) broth
  • Rabbit plasma
  • Simmons’ citrate agar slant
  • Spirit blue agar plate
  • Starch agar
  • Triple sugar iron agar slant
  • Tryptone broth

Reagents, Chemicals, Stains

  • Ammonium Sulfate (saturated)
  • Barritt’s A reagent
  • Barritt’s B reagent
  • Crystal Violet
  • Ferric chloride (10%) reagent
  • Gram’s Decolorizer
  • Gram’s Iodine
  • HCl 0.1N reagent
  • Hydrogen peroxide
  • Iodine reagent
  • Kovac’s reagent
  • Methyl red reagent
  • Nitrate A reagent
  • Nitrate B reagent
  • Oxidase reagent
  • Rabbit Plasma
  • Safranine

Deoxyribonuclease (DNase) test

About this test

What is the purpose of the test?  

The purpose is to see if the microbe can use DNA as a source of carbon and energy for growth. Use of DNA is accomplished by an enzyme called DNase .

How is DNase activity determined?  

A medium containing DNA and an indicator is used. The indicator complexes with intact DNA , making the medium appear mint green. When DNA is digested, the indicator changes from mint green to clear. Halos surrounding colonies is indicative of their ability to digest the DNA in the medium due to the presence of DNase .

What medium is used?  

The medium used is DNase agar with methyl green. The medium is a nutrient agar to which DNA is added. The indicator methyl green produces a mint green medium.

How is the test performed?  

An inoculum from a pure culture is streaked on a sterile plate of DNase agar.   The inoculated plate is incubated at 37 C for 24 hours. Presence of clear halos surrounding colonies is positive for their ability to digest the DNA and thus indicates presence of DNase.

What reagents are added?  

None.

Performing this test in the VUMIE Online lab

Inoculation of Medium

1. Select the DNase agar with methyl green plate medium.  

2. Complete the process of a tube-to-plate aseptic transfer to inoculate the medium.

Incubation of the Inoculated Medium

3. Place the inoculated tube into the 35-37 C incubator.  

4. Press the New Day button to move forward 24 hours.

Determination of Test Results

5. Incubate this test for only 24 hours.  

6. Retrieve the incubated culture from the incubator.

7. Observe the color of the medium surrounding colonies in the plate. The culture showing clear halos around colonies is capable of breaking down DNA. The medium surrounding colonies without DNase remains unchanged.  

8. Record test result.  

Uninoculated DNase Agar with Methyl Green

Positive Test – halos clearing agar

Negative Test – no clearing


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Updated on November 1, 2022
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